From my experience I gotta say it did not happen this way for.
Quick recap, I went from minor pentatonic like most, to 7 positions. Of course I thought those were modes.
To 3nps, with a quick detour to 4nps to 5 positions.
Shedded changes like mad with my newfound knowledge of where the roots were.
Like playing in one position moving through different cycles. Like minor thirds.
Now mind you at that time I still broke stuff down to keycenter. As in over say G7 I was playing C target the sounds of its V chord.
Then I added the altered options which is where it got funny.
Let’s say you play G-7 C7 F-7 B♭7 E♭-7 A♭7♭9♯5 D♭△7 finding the roots coming from the 2-5s staying in position when chords change every half bar or bar made for a fun exercise but sure not music.
Just the same with the practice everything in 12 keys.
What finally worked well for me was learning lines and seeing and hearing their internal harmony without chords underneath.
As in any line has points of tension and resolution. Once I got that learning how that harmony and actual harmony it goes on top of start to make for interesting stuff I was finally able to improvise in a sensible manner that wasn’t hodgepidging scale runs, arpeggios and tricks.